Accessor for motif site positions

Returns the GRanges of all instances of the user-specified sequence motif in the genome, as computed by findMotifSites during object construction.

Usage

motifSites(object)

# S4 method for class 'commaData'
motifSites(object)

Arguments

object

A commaData object.

Value

A GRanges object. May be empty (length 0) if no motif was specified at construction.

Examples

data(comma_example_data)
motifSites(comma_example_data)
#> GRanges object with 0 ranges and 0 metadata columns:
#>    seqnames    ranges strand
#>       <Rle> <IRanges>  <Rle>
#>   -------
#>   seqinfo: no sequences